Garvan Institute of Medical Research

AMYPred-FRL is a novel approach for accurate prediction of amyloid proteins by using feature representation learning

Charoenkwan, P.; Ahmed, S.; Nantasenamat, C.; Quinn, J. M. W.; Moni, M. A.; Lio, P.; Shoombuatong, W.

Scientific Reports 12 (1) :7697, 2022 10.1038/s41598-022-11897-z

Severe COVID-19 represents an undiagnosed primary immunodeficiency in a high proportion of infected individuals

Gray, P. E.; Bartlett, A. W.; Tangye, S. G.

Clinical & Translational Immunology 11 (4) :e1365, 2022 10.1002/cti2.1365

Primary skeletal muscle cells from chronic kidney disease patients retain hallmarks of cachexia in vitro

Baker, L. A.; O'Sullivan, T. F.; Robinson, K. A.; Graham-Brown, M. P. M.; Major, R. W.; Ashford, R. U.; Smith, A. C.; Philp, A.; Watson, E. L.

Journal of Cachexia Sarcopenia and Muscle 13 (2) :1238-1249, 2022 10.1002/jcsm.12802

SCORPION is a stacking-based ensemble learning framework for accurate prediction of phage virion proteins

Ahmad, S.; Charoenkwan, P.; Quinn, J. M. W.; Moni, M. A.; Hasan, M. M.; Lio, P.; Shoombuatong, W.

Scientific Reports 12 (1) :4106, 2022 10.1038/s41598-022-08173-5

Nanopore Sequencing and Data Analysis for Base-Resolution Genome-Wide 5-Methylcytosine Profiling

Angeloni, A.; Ferguson, J.; Bogdanovic, O.

Methods in Molecular Biology 2458 :75-94, 2022 10.1007/978-1-0716-2140-0_5

Horizontal Transposon Transfer and Its Implications for the Ancestral Ecology of Hydrophiine Snakes

Galbraith, J. D.; Ludington, A. J.; Sanders, K. L.; Amos, T. G.; Thomson, V. A.; Enosi Tuipulotu, D.; Dunstan, N.; Edwards, R. J.; Suh, A.; Adelson, D. L.

Genes (Basel) 13 (2) 2022 10.3390/genes13020217

Unselected Women's Experiences of Receiving Genetic Research Results for Hereditary Breast and Ovarian Cancer: A Qualitative Study

Forbes Shepherd, R.; Forrest, L. E.; Tutty, E.; Pearce, A.; Devereux, L.; James, P. A.; Campbell, I. G.; Trainer, A.; Young, M. A.

GENET TEST MOL BIOMA 25 (12) :741-748, 2021 10.1089/gtmb.2021.0115

Bisphosphonate drugs have actions in the lung and inhibit the mevalonate pathway in alveolar macrophages

Munoz, M. A.; Fletcher, E. K.; Skinner, O. P.; Jurczyluk, J.; Kristianto, E.; Hodson, M. P.; Sun, S.; Ebetino, F. H.; Croucher, D. R.; Hansbro, P. M.; Center, J. R.; Rogers, M. J.

eLife 10 :e72430, 2021 10.7554/eLife.72430

DropletQC: improved identification of empty droplets and damaged cells in single-cell RNA-seq data

Muskovic, W.; Powell, J. E.

GENOME BIOLOGY 22 (1) :329, 2021 10.1186/s13059-021-02547-0

Identification of DNA methylation biomarkers with potential to predict response to neoadjuvant chemotherapy in triple-negative breast cancer

Meyer, B.; Clifton, S.; Locke, W.; Luu, P. L.; Du, Q.; Lam, D.; Armstrong, N. J.; Kumar, B.; Deng, N.; Harvey, K.; Swarbrick, A.; Ganju, V.; Clark, S. J.; Pidsley, R.; Stirzaker, C.

Clinical Epigenetics 13 (1) :226, 2021 10.1186/s13148-021-01210-6

Change in the prevalence of myopia in Australian middle-aged adults across 20 years

Mackey, D. A.; Lingham, G.; Lee, S. S.; Hunter, M.; Wood, D.; Hewitt, A. W.; Mitchell, P.; Taylor, H. R.; Hammond, C. J.; Yazar, S.

Clincal & experimental opthalmology 49 (9) :1039-1047, 2021 10.1111/ceo.13980

The Additive Diagnostic Value of Prostate-specific Membrane Antigen Positron Emission Tomography Computed Tomography to Multiparametric Magnetic Resonance Imaging Triage in the Diagnosis of Prostate Cancer (PRIMARY): A Prospective Multicentre Study

Emmett, L.; Buteau, J.; Papa, N.; Moon, D.; Thompson, J.; Roberts, M. J.; Rasiah, K.; Pattison, D. A.; Yaxley, J.; Thomas, P.; Hutton, A. C.; Agrawal, S.; Amin, A.; Blazevski, A.; Chalasani, V.; Ho, B.; Nguyen, A.; Liu, V.; Lee, J.; Sheehan-Dare, G.; Kooner, R.; Coughlin, G.; Chan, L.; Cusick, T.; Namdarian, B.; Kapoor, J.; Alghazo, O.; Woo, H. H.; Lawrentschuk, N.; Murphy, D.; Hofman, M. S.; Stricker, P.

EUROPEAN UROLOGY 2021 10.1016/j.eururo.2021.08.002

Expression of the chemokine receptor CCR1 promotes the dissemination of multiple myeloma plasma cells <i>in vivo</i>

Zeissig, M. N.; Hewett, D. R.; Panagopoulos, V.; Mrozik, K. M.; To, L. B.; Croucher, P. I.; Zannettino, A. C. W.; Vandyke, K.

HAEMATOLOGICA 106 (12) :3176-3187, 2021 10.3324/haematol.2020.253526

Natural-Product-Based Solutions for Tropical Infectious Diseases

Adegboye, O.; Field, M. A.; Kupz, A.; Pai, S.; Sharma, D.; Smout, M. J.; Wangchuk, P.; Wong, Y.; Loiseau, C.

CLINICAL MICROBIOLOGY REVIEWS 34 (4) :e0034820, 2021 10.1128/CMR.00348-20

Liraglutide Inhibits Osteoclastogenesis and Improves Bone Loss by Downregulating Trem2 in Female Type 1 Diabetic Mice: Findings From Transcriptomics

Yu, J.; Shi, Y. C.; Ping, F.; Li, W.; Zhang, H. B.; He, S. L.; Zhao, Y.; Xu, L. L.; Li, Y. X.

Frontiers in Endocrinology 12 :763646, 2021 10.3389/fendo.2021.763646

Tacrolimus Therapy in Adult Heart Transplant Recipients: Evaluation of a Bayesian Forecasting Software

Kirubakaran, R.; Stocker, S. L.; Carlos, L.; Day, R. O.; Carland, J. E.