Publications

9 items matching your search terms.

DNA methylation is required to maintain both DNA replication timing precision and 3D genome organization integrity

Du, Q.; Smith, G. C.; Luu, P. L.; Ferguson, J. M.; Armstrong, N. J.; Caldon, C. E.; Campbell, E. M.; Nair, S. S.; Zotenko, E.; Gould, C. M.; Buckley, M.; Chia, K. M.; Portman, N.; Lim, E.; Kaczorowski, D.; Chan, C. L.; Barton, K.; Deveson, I. W.; Smith, M. A.; Powell, J. E.; Skvortsova, K.; Stirzaker, C.; Achinger-Kawecka, J.; Clark, S. J.

Cell Reports 36 (12) :109722, 2021 10.1016/j.celrep.2021.109722

BRG1 knockdown inhibits proliferation through multiple cellular pathways in prostate cancer

Giles, K. A.; Gould, C. M.; Achinger-Kawecka, J.; Page, S. G.; Kafer, G. R.; Rogers, S.; Luu, P. L.; Cesare, A. J.; Clark, S. J.; Taberlay, P. C.

Clinical Epigenetics 13 (1) :37, 2021 10.1186/s13148-021-01023-7

Epigenetic reprogramming at estrogen-receptor binding sites alters 3D chromatin landscape in endocrine-resistant breast cancer

Achinger-Kawecka, J.; Valdes-Mora, F.; Luu, P. L.; Giles, K. A.; Caldon, C. E.; Qu, W.; Nair, S.; Soto, S.; Locke, W. J.; Yeo-Teh, N. S.; Gould, C. M.; Du, Q.; Smith, G. C.; Ramos, I. R.; Fernandez, K. F.; Hoon, D. S.; Gee, J. M. W.; Stirzaker, C.; Clark, S. J.

Nature Communications 11 (1) :320, 2020 10.1038/s41467-019-14098-x

Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains

Khoury, A.; Achinger-Kawecka, J.; Bert, S. A.; Smith, G. C.; French, H. J.; Luu, P. L.; Peters, T. J.; Du, Q.; Parry, A. J.; Valdes-Mora, F.; Taberlay, P. C.; Stirzaker, C.; Statham, A. L.; Clark, S. J.

Nature Communications 11 (1) :54, 2020 10.1038/s41467-019-13753-7

Integrated epigenomic analysis stratifies chromatin remodellers into distinct functional groups

Giles, K. A.; Gould, C. M.; Du, Q.; Skvortsova, K.; Song, J. Z.; Maddugoda, M. P.; Achinger-Kawecka, J.; Stirzaker, C.; Clark, S. J.; Taberlay, P. C.

Epigenetics & Chromatin 12 (1) :12, 2019 10.1186/s13072-019-0258-9

The Assessment of Clinical Usage and Prognostic Value of YKL-40 Serum Levels in Patients With Rectal Cancer Without Distant Metastasis

Fuksiewicz, M.; Kotowicz, B.; Rutkowski, A.; Achinger-Kawecka, J.; Wagrodzki, M.; Kowalska, M. M.

TECHNOLOGY IN CANCER RESEARCH & TREATMENT 17 :1533033818765209, 2018 10.1177/1533033818765209

Alterations in Three-Dimensional Organization of the Cancer Genome and Epigenome

Achinger-Kawecka, J.; Taberlay, P. C.; Clark, S. J.

Cold Spring Harb Symp Quant Biol 81 :41-51, 2017 10.1101/sqb.2016.81.031013

Disruption of the 3D cancer genome blueprint

Achinger-Kawecka, J.; Clark, S. J.

Epigenomics 9 (1) :47-55, 2017 10.2217/epi-2016-0111

Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations

Taberlay, P. C. ; Achinger-Kawecka, J. ; Lun, A. T. ; Buske, F. A. ; Sabir, K. ; Gould, C. M. ; Zotenko, E. ; Bert, S. A. ; Giles, K. A. ; Bauer, D. C. ; Smyth, G. K. ; Stirzaker, C. ; O'Donoghue, S. I. ; Clark, S. J.;

GENOME RESEARCH 26 (6) :719-31, 2016