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17 items matching your search terms.
Molecular Graphics: Bridging Structural Biologists and Computer Scientists
Martinez, X.; Krone, M.; Alharbi, N.; Rose, A. S.; Laramee, R. S.; O'Donoghue, S.; Baaden, M.; Chavent, M.
STRUCTURE 27 (11) :1617-1623, 2019 10.1016/j.str.2019.09.001
SnapShot: S-Phase Entry and Exit
Burgess, A.; Vuong, J.; Marzec, K. A.; Nicolai de Lichtenberg, U.; O'Donoghue, S. I.; Jensen, L. J.
CELL 179 (3) :802-802 e1, 2019 10.1016/j.cell.2019.09.031
OpenAccess publication A benchmark dataset for analyzing and visualizing the dynamic epiproteome
Kaur, S.; Baldi, B.; Vuong, J.; O'Donoghue, S. I.
Data in Brief 25 :104000, 2019 10.1016/j.dib.2019.104000
Visualization and Analysis of Epiproteome Dynamics
Kaur, S.; Baldi, B.; Vuong, J.; O'Donoghue, S. I.
JOURNAL OF MOLECULAR BIOLOGY 431 (8) :1519-1539, 2019 10.1016/j.jmb.2019.01.044
OpenAccess publication Dark Proteins Important for Cellular Function
Schafferhans, A.; O'Donoghue, S. I.; Heinzinger, M.; Rost, B.
PROTEOMICS :e1800227, 2018 10.1002/pmic.201800227
The Dark Proteome Database
Perdigao, N.; Rosa, A. C.; O'Donoghue, S. I.
BioData Mining 10 :24, 2017 10.1186/s13040-017-0144-6
SnapShot: Phosphoregulation of Mitosis
Burgess, A.; Vuong, J.; Rogers, S.; Malumbres, M.; O'Donoghue, S. I.
CELL 169 (7) :1358-1358.e1, 2017 10.1016/j.cell.2017.06.003
OpenAccess publication Monogenic and polygenic determinants of sarcoma risk: an international genetic study
Ballinger, M. L.; Goode, D. L.; Ray-Coquard, I.; James, P. A.; Mitchell, G.; Niedermayr, E.; Puri, A.; Schiffman, J. D.; Dite, G. S.; Cipponi, A.; Maki, R. G.; Brohl, A. S.; Myklebost, O.; Stratford, E. W.; Lorenz, S.; Ahn, S. M.; Ahn, J. H.; Kim, J. E.; Shanley, S.; Beshay, V.; Randall, R. L.; Judson, I.; Seddon, B.; Campbell, I. G.; Young, M. A.; Sarin, R.; Blay, J. Y.; O'Donoghue, S. I.; Thomas, D. M.; International Sarcoma Kindred, Study;
LANCET ONCOLOGY 17 (9) :1261-71, 2016
OpenAccess publication Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
Taberlay, P. C.; Achinger-Kawecka, J.; Lun, A. T.; Buske, F. A.; Sabir, K.; Gould, C. M.; Zotenko, E.; Bert, S. A.; Giles, K. A.; Bauer, D. C.; Smyth, G. K.; Stirzaker, C.; O'Donoghue, S. I.; Clark, S. J.;
GENOME RESEARCH 26 (6) :719-31, 2016
OpenAccess publication Unexpected features of the ‘dark’ proteome
PerdigAPSo, N.; Heinrich, J.; Stolte, C.; Sabir, K.S.; Buckley, M.J.; Tabor, B; Signal, B; Gloss, B.S.; Hammang, C.J.; Rost, B.; Schafferhans, A.; OaDonoghue, S.I.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 112 (52) :15898-903, 2015
OpenAccess publication Aquaria: Simplifying discovery and insight from protein structures
O'Donoghue, S. I.; Sabir, K. S.; Kalemanov, M.; Stolte, C.; Wellmann, B.; Ho, V.; Roos, M.; Perdigao, N.; Buske, F. A.; Heinrich, J.; Rost, B.; Schafferhans, A.
NATURE METHODS 12 (2) :98-99, 2015
Unexpected features of the dark proteome
Perdigao, N.; Heinrich, J.; Stolte, C.; Sabir, K. S.; Buckley, M. J.; Tabor, B.; Signal, B.; Gloss, B. S.; Hammang, C. J.; Rost, B.; Schafferhans, A.; O'Donoghue, S. I.;
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 112 (52) :15898-903, 2015
OpenAccess publication Comprehensive comparison of large-scale tissue expression datasets
Santos, A.; Tsafou, K.; Stolte, C.; Pletscher-Frankild, S.; O'Donoghue, S. I.; Jensen, L. J.;
PeerJ 3 :e1054, 2015
SnapShot: insulin/IGF1 signaling
Ma, D. K.; Stolte, C.; Krycer, J. R.; James, D. E.; O'Donoghue, S. I.;
CELL 161 (4) :948-948 e1, 2015
Visual analytics of signalling pathways using time profiles
Ma, D. K.; Stolte, C.; Kaur, S.; Bain, M.; O'Donoghue, S. I.;
Advances in Experimental Medicine and Biology 823 :3-22, 2015