19 items matching your search terms.
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Identification of DNA methylation biomarkers with potential to predict response to neoadjuvant chemotherapy in triple-negative breast cancer
- Meyer, B.; Clifton, S.; Locke, W.; Luu, P. L.; Du, Q.; Lam, D.; Armstrong, N. J.; Kumar, B.; Deng, N.; Harvey, K.; Swarbrick, A.; Ganju, V.; Clark, S. J.; Pidsley, R.; Stirzaker, C.
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Clinical Epigenetics
13
(1)
:226,
2021
10.1186/s13148-021-01210-6
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MethPanel: a parallel pipeline and interactive analysis tool for multiplex bisulphite PCR sequencing to assess DNA methylation biomarker panels for disease detection
- Luu, P. L.; Ong, P. T.; Loc, T. T. H.; Lam, D.; Pidsley, R.; Stirzaker, C.; Clark, S. J.
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Bioinformatics
:btaa1060.,
2020
10.1093/bioinformatics/btaa1060
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Advances in Prognostic Methylation Biomarkers for Prostate Cancer
- Lam, D.; Clark, S.; Stirzaker, C.; Pidsley, R.
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Cancers
12
(10)
:2993,
2020
10.3390/cancers12102993
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Comprehensive evaluation of targeted multiplex bisulphite PCR sequencing for validation of DNA methylation biomarker panels
- Lam, D.; Luu, P. L.; Song, J. Z.; Qu, W.; Risbridger, G. P.; Lawrence, M. G.; Lu, J.; Trau, M.; Korbie, D.; Clark, S. J.; Pidsley, R.; Stirzaker, C.
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Clinical Epigenetics
12
(1)
:90,
2020
10.1186/s13148-020-00880-y
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Alterations in the methylome of the stromal tumour microenvironment signal the presence and severity of prostate cancer
- Lawrence, M. G.; Pidsley, R.; Niranjan, B.; Papargiris, M.; Pereira, B. A.; Richards, M.; Teng, L.; Norden, S.; Ryan, A.; Frydenberg, M.; Stirzaker, C.; Taylor, R. A.; Risbridger, G. P.; Clark, S. J.
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Clinical Epigenetics
12
(1)
:48,
2020
10.1186/s13148-020-00836-2
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Cancer Methylation Biomarkers in circulating cell-free DNA.
- Pidsley R, Stirzaker C
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Clinical Epigenetics
:217-245,
2019
10.1007/978-981-13-8958-0_10
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Evaluation of cross-platform and interlaboratory concordance via consensus modelling of genomic measurements
- Peters, T. J.; French, H. J.; Bradford, S. T.; Pidsley, R.; Stirzaker, C.; Varinli, H.; Nair, S.; Qu, W.; Song, J.; Giles, K. A.; Statham, A. L.; Speirs, H.; Speed, T. P.; Clark, S. J.
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Bioinformatics
35
(4)
:560-570,
2019
10.1093/bioinformatics/bty675
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DNA Hypermethylation Encroachment at CpG Island Borders in Cancer Is Predisposed by H3K4 Monomethylation Patterns
- Skvortsova, K.; Masle-Farquhar, E.; Luu, P. L.; Song, J. Z.; Qu, W.; Zotenko, E.; Gould, C. M.; Du, Q.; Peters, T. J.; Colino-Sanguino, Y.; Pidsley, R.; Nair, S. S.; Khoury, A.; Smith, G. C.; Miosge, L. A.; Reed, J. H.; Kench, J. G.; Rubin, M. A.; Horvath, L.; Bogdanovic, O.; Lim, S. M.; Polo, J. M.; Goodnow, C. C.; Stirzaker, C.; Clark, S. J.
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CANCER CELL
35
(2)
:297-314 e8,
2019
10.1016/j.ccell.2019.01.004
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Enduring epigenetic landmarks define the cancer microenvironment
- Pidsley, R.; Lawrence, M. G.; Zotenko, E.; Niranjan, B.; Statham, A.; Song, J.; Chabanon, R. M.; Qu, W.; Wang, H.; Richards, M.; Nair, S. S.; Armstrong, N. J.; Nim, H. T.; Papargiris, M.; Balanathan, P.; French, H.; Peters, T.; Norden, S.; Ryan, A.; Pedersen, J.; Kench, J.; Daly, R. J.; Horvath, L. G.; Stricker, P.; Frydenberg, M.; Taylor, R. A.; Stirzaker, C.; Risbridger, G. P.; Clark, S. J.
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GENOME RESEARCH
28
(5)
:625-638,
2018
10.1101/gr.229070.117
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Methyl-CpG-binding protein MBD2 plays a key role in maintenance and spread of DNA methylation at CpG islands and shores in cancer
- Stirzaker, C.; Song, J. Z.; Ng, W.; Du, Q.; Armstrong, N. J.; Locke, W. J.; Statham, A. L.; French, H.; Pidsley, R.; Valdes-Mora, F.; Zotenko, E.; Clark, S. J.
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ONCOGENE
36
(10)
:1328-1338,
2017
10.1038/onc.2016.297
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Schizophrenia-associated methylomic variation: molecular signatures of disease and polygenic risk burden across multiple brain regions
- Viana, J.; Hannon, E.; Dempster, E.; Pidsley, R.; Macdonald, R.; Knox, O.; Spiers, H.; Troakes, C.; Al-Saraj, S.; Turecki, G.; Schalkwyk, L. C.; Mill, J.
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HUMAN MOLECULAR GENETICS
26
(1)
:210-225,
2017
10.1093/hmg/ddw373
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Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling
- Pidsley, R.
; Zotenko, E.
; Peters, T. J.
; Lawrence, M. G.
; Risbridger, G. P.
; Molloy, P.
; Van Djik, S.
; Muhlhausler, B.
; Stirzaker, C.
; Clark, S. J.;
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GENOME BIOL
17
(1)
:208,
2016
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Genome-scale methylation assessment did not identify prognostic biomarkers in oral tongue carcinomas
- Lim, A. M.
; Wong, N. C.
; Pidsley, R.
; Zotenko, E.
; Corry, J.
; Dobrovic, A.
; Clark, S. J.
; Rischin, D.
; Solomon, B.;
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Clinical Epigenetics
8
:74,
2016
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Methylation QTLs in the developing brain and their enrichment in schizophrenia risk loci
- Hannon, E.
; Spiers, H.
; Viana, J.
; Pidsley, R.
; Burrage, J.
; Murphy, T. M.
; Troakes, C.
; Turecki, G.
; O'Donovan, M. C.
; Schalkwyk, L. C.
; Bray, N. J.
; Mill, J.;
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NATURE NEUROSCIENCE
19
(1)
:48-54,
2016
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DNA methylation profiles in preeclampsia and healthy control placentas
- Yeung, K. R.
; Chiu, C. L.
; Pidsley, R.
; Makris, A.
; Hennessy, A.
; Lind, J. M.;
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AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY
310
(10)
:H1295-303,
2016
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Methylomic analysis of monozygotic twins discordant for childhood psychotic symptoms
- Fisher, H. L.
; Murphy, T. M.
; Arseneault, L.
; Caspi, A.
; Moffitt, T. E.
; Viana, J.
; Hannon, E.
; Pidsley, R.
; Burrage, J.
; Dempster, E. L.
; Wong, C. C.
; Pariante, C. M.
; Mill, J.;
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Epigenetics
10
:1014-1023,
2015