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118 items matching your search terms.
OpenAccess publication Alterations in Three-Dimensional Organization of the Cancer Genome and Epigenome
Achinger-Kawecka, J.; Taberlay, P. C.; Clark, S. J.
Cold Spring Harb Symp Quant Biol 81 :41-51, 2017 10.1101/sqb.2016.81.031013
OpenAccess publication Disruption of the 3D cancer genome blueprint
Achinger-Kawecka, J.; Clark, S. J.
Epigenomics 9 (1) :47-55, 2017 10.2217/epi-2016-0111
Nucleotide-Level Profiling of m(5)C RNA Methylation
Sibbritt, T. ; Shafik, A. ; Clark, S. J. ; Preiss, T.;
Methods in Molecular Biology 1358 :269-84, 2016
OpenAccess publication DNA methylation profile of triple negative breast cancer-specific genes comparing lymph node positive patients to lymph node negative patients
Mathe, A. ; Wong-Brown, M. ; Locke, W. J. ; Stirzaker, C. ; Braye, S. G. ; Forbes, J. F. ; Clark, S. J. ; Avery-Kiejda, K. A. ; Scott, R. J.;
Scientific Reports 6 :33435, 2016
OpenAccess publication Genome-wide DNA methylation profiling in triple-negative breast cancer reveals epigenetic signatures with important clinical value
Stirzaker, C. ; Zotenko, E. ; Clark, S. J.;
MOLECULAR & CELLULAR ONCOLOGY 3 (1) :e1038424, 2016
OpenAccess publication Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling
Pidsley, R. ; Zotenko, E. ; Peters, T. J. ; Lawrence, M. G. ; Risbridger, G. P. ; Molloy, P. ; Van Djik, S. ; Muhlhausler, B. ; Stirzaker, C. ; Clark, S. J.;
GENOME BIOL 17 (1) :208, 2016
OpenAccess publication Three-dimensional disorganization of the cancer genome occurs coincident with long-range genetic and epigenetic alterations
Taberlay, P. C. ; Achinger-Kawecka, J. ; Lun, A. T. ; Buske, F. A. ; Sabir, K. ; Gould, C. M. ; Zotenko, E. ; Bert, S. A. ; Giles, K. A. ; Bauer, D. C. ; Smyth, G. K. ; Stirzaker, C. ; O'Donoghue, S. I. ; Clark, S. J.;
GENOME RESEARCH 26 (6) :719-31, 2016
OpenAccess publication Genome-scale methylation assessment did not identify prognostic biomarkers in oral tongue carcinomas
Lim, A. M. ; Wong, N. C. ; Pidsley, R. ; Zotenko, E. ; Corry, J. ; Dobrovic, A. ; Clark, S. J. ; Rischin, D. ; Solomon, B.;
Clinical Epigenetics 8 :74, 2016
OpenAccess publication H2A.Z acetylation and transcription: ready, steady, go!
Colino-Sanguino, Y. ; Clark, S. J. ; Valdes-Mora, F.;
Epigenomics 8 (5) :583-6, 2016
OpenAccess publication ELF5 drives lung metastasis in luminal breast cancer through recruitment of Gr1+ CD11b+ myeloid-derived suppressor cells
Gallego-Ortega, D.; Ledger, A.; Roden, D. L.; Law, A. M.; Magenau, A.; Kikhtyak, Z.; Cho, C.; Allerdice, S. L.; Lee, H. J.; Valdes-Mora, F.; Herrmann, D.; Salomon, R.; Young, A. I.; Lee, B. Y.; Sergio, C. M.; Kaplan, W.; Piggin, C.; Conway, J. R.; Rabinovich, B.; Millar, E. K.; Oakes, S. R.; Chtanova, T.; Swarbrick, A.; Naylor, M. J.; O'Toole, S.; Green, A. R.; Timpson, P.; Gee, J. M.; Ellis, I. O.; Clark, S. J.; Ormandy, C. J.;
PLOS BIOL 13 (12) :e1002330, 2015 10.1371/journal.pbio.1002330
OpenAccess publication DNA methylation of oestrogen-regulated enhancers defines endocrine sensitivity in breast cancer
Stone, A.; Zotenko, E.; Locke, W. J; Korbie, D.; Millar, E. K.; Pidsley, R.; Stirzaker, C.; Graham, P.; Trau, M.; Musgrove, E. A.; Nicholson, R. I.; Gee, J. M.; Clark, S. J.:
Nature Communications 6 :7758, 2015
Methylome sequencing in triple-negative breast cancer reveals distinct methylation clusters with prognostic value
Stirzaker, C. ; Zotenko, E. ; Song, J. Z. ; Qu, W. ; Nair, S. S. ; Locke, W. J. ; Stone, A. ; Armstong, N. J. ; Robinson, M. D. ; Dobrovic, A. ; Avery-Kiejda, K. A. ; Peters, K. M. ; French, J. D. ; Stein, S. ; Korbie, D. J. ; Trau, M. ; Forbes, J. F. ; Scott, R. J. ; Brown, M. A. ; Francis, G. D. ; Clark, S. J.;
Nature Communications 6 :5899, 2015
De novo identification of differentially methylated regions in the human genome
Peters, T. J. ; Buckley, M. J. ; Statham, A. L. ; Pidsley, R. ; Samaras, K. ; R, V. Lord ; Clark, S. J. ; Molloy, P. L.;
Epigenetics & Chromatin 8 :6, 2015
Coordinated epigenetic remodelling of transcriptional networks occurs during early breast carcinogenesis
Locke, W. J. ; Zotenko, E. ; Stirzaker, C. ; Robinson, M. D. ; Hinshelwood, R. A. ; Stone, A. ; Reddel, R. R. ; Huschtscha, L. I. ; Clark, S. J.;
Clinical Epigenetics 7 (1) :52, 2015
OpenAccess publication Prostate cancer epigenetic biomarkers: next-generation technologies
Valdes-Mora, F. ; Clark, S. J.;
ONCOGENE 34 (13) :1609-1618, 2015
Methyl-CpG-binding domain proteins: readers of the epigenome
Du, Q. ; Luu, P. L. ; Stirzaker, C. ; Clark, S. J.;
Epigenomics :1-23, 2015